{ "info": { "author": "Michael Habeck et al.", "author_email": "ivan.kalev@gmail.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 5 - Production/Stable", "Intended Audience :: Developers", "Intended Audience :: Science/Research", "License :: OSI Approved :: MIT License", "Operating System :: OS Independent", "Programming Language :: Python", "Programming Language :: Python :: 2.7", "Programming Language :: Python :: 3.1", "Programming Language :: Python :: 3.2", "Programming Language :: Python :: 3.3", "Programming Language :: Python :: 3.4", "Programming Language :: Python :: 3.5", "Programming Language :: Python :: 3.6", "Topic :: Scientific/Engineering", "Topic :: Scientific/Engineering :: Bio-Informatics", "Topic :: Scientific/Engineering :: Mathematics", "Topic :: Scientific/Engineering :: Physics", "Topic :: Software Development :: Libraries" ], "description": "Computational Structural Biology Toolbox\n========================================\n\nCSB is a python library and application framework, which can be used\nto solve problems in the field of structural bioinformatics. If\nyou are a bioinformatician, software engineer or a researcher working\nin this field, chances are you may find something useful here. Our\npackage consists of a few major components:\n\n1. Core class library - object-oriented, granular, with an emphasis\n on design and clean interfaces.\n\n2. Application framework - console applications (\"protocols\"),\n which consume objects from the core library in order to build\n something executable (and hopefully useful).\n\n3. Test framework - ensures that the library *actually* works.\n\n\nInstallation \n------------\nCSB is being developed on Linux with Python 2.7 and 3.6. However, compatibility\nis a design goal and the package works on any platform, on any modern Python\ninterpreter since version 2.6 (that includes python 3 support out of\nthe box). If you find any issues on a platform/interpreter different from\nour development environment, please let us know.\n\nCSB and all of its dependencies can be installed with pip::\n\n $ pip install csb\n\nSee http://csb-toolbox.github.io/Installation for more details.\n\n\nRunning CSB Applications\n------------------------\n\nCSB is bundled with a number of executable console csb.apps. Each app\nprovides a standard command line interface. To run any app, try::\n\n $ csb-app --help\n \nwhere *csb-app* is the name of the application, such as ``csb-hhfrag``.\nFor more details on our app framework, including guidelines for writing new\napplications, please refer to the API documentation, package \"csb.apps\".\n\n\nDocumentation\n-------------\n\nThe project's web site at `GitHub `_ contains\nonline documentation and samples. Visit us at:\n \nhttp://csb-toolbox.github.io\n\nDetailed API documentation can be found in the \"docs/api\" directory in the\ndistribution package (docs/api/index.html). This documentaiton is also hosted\non our web site:\n\nhttps://csb-toolbox.github.io/api-docs/\n\nMany packages contain introductory module level documentation and samples/tutorials.\nThese are also available in the HTML docs, but a quick way to access them is by using\nthe built-in python help system. For example, for a general introduction\nsee the module documentation of the root package::\n\n $ python -c \"import csb; help(csb)\"\n\nIf you are interested in a specific package, such as cs.bio.sequence,\ntry:: \n \n $ python -c \"import csb.bio.sequence; help(csb.bio.sequence)\"\n\n\nContact\n-------\n\nCSB is developed by Michael Habeck's Computational Structural Biology\n`research group `_.\n \nFor complete source code, contributions, support or bug reports please visit\nus on GitHub:\n \nhttp://github.com/csb-toolbox/\n \n\nLicense\n-------\n\nCSB is open source and distributed under OSI-approved MIT license.\n::\n\n Copyright (c) 2012 Michael Habeck\n \n Permission is hereby granted, free of charge, to any person obtaining\n a copy of this software and associated documentation files (the\n \"Software\"), to deal in the Software without restriction, including\n without limitation the rights to use, copy, modify, merge, publish,\n distribute, sublicense, and/or sell copies of the Software, and to\n permit persons to whom the Software is furnished to do so, subject to\n the following conditions:\n \n The above copyright notice and this permission notice shall be\n included in all copies or substantial portions of the Software.\n \n THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND,\n EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF\n MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.\n IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY\n CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,\n TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE\n SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.\n \n\n\n.. image:: https://travis-ci.org/csb-toolbox/CSB.svg?branch=master\n \u00a0 :target: https://travis-ci.org/csb-toolbox", "description_content_type": null, "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, 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