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        "description": "# Cortix\nA Python library for network dynamics modeling and HPC simulation.\n  + [Cortix on Jupyter notebook examples](https://github.com/dpploy/cortix-nb)\n  + [Documentation on the web](https://cortix.org)\n\n![Website](https://img.shields.io/website/https/github.com/dpploy/cortix.svg)\n[![Repo Size](https://img.shields.io/github/repo-size/dpploy/cortix.svg?style=flat)](https://cortix.org)\n[![PyPI version](https://badge.fury.io/py/cortix.svg)](https://badge.fury.io/py/cortix)\n[![PyPI - Python Version](https://img.shields.io/pypi/pyversions/Django.svg)](https://badge.fury.io/py/cortix)\n\n[![codecov](https://codecov.io/gh/dpploy/cortix/branch/master/graph/badge.svg)](https://codecov.io/gh/dpploy/cortix)\n\n![](cortix/docs/cortix-cover.png)\n\n## What is Cortix?\n\n* Cortix is a massively parallel Python library for system-level module coupling, execution, and\n  analysis of dynamical system models that exchange time-dependent data.\n* Cortix takes as input a collection of computational modules and provides an \n  environment for the coupling of these modules into a single simulation.\n* Cortix supports:\n    - Module decoupling\n    - Communication between modules\n    - Data visualization\n* Cortix runs on top of [MPI](https://www.open-mpi.org/) and scales across many cores.\n\n\n## Installation: start by installing [MPI](https://www.open-mpi.org/)\n\n## Installing via PyPI\n```\npip install --user cortix\n```\n\n## Installing from source\n1. Clone this repository to install the latest version of Cortix \n```\ngit clone https://github.com/dpploy/cortix.git\n```\n2. Install the required dependencies listed in `requirements.txt`\n```\npip install --user -r cortix/requirements.txt\n```\n3. Add ```cortix```'s parent path to your ```$PYTHONPATH``` variable\n```\nexport PYTHONPATH=$PYTHONPATH:$(pwd)\n```\nNote: you may want to add this line to your ```.bashrc``` in order for it to be persistent\n\n### Verify your Cortix install by running the Droplet example\n```\nmpirun -np 12 examples/droplet_run.py\n```\n\n## Testing\n\nTesting is facilitated by [PyTest](http://pytest.org). Tests can be run locally from within the `tests` directory\n```\ncd tests && py.test\n```\n\n## Using Cortix\n\nPlease refer to the [documentation](https://cortix.org/contents.html) for more on getting started!\n\n## Team \n\n- Valmor F. de Almeida: valmor\\_dealmeida@uml.edu\n- Taha M. Azzaoui: tazzaoui@cs.uml.edu\n- Seamus D. Gallagher: seamus\\_gallagher@student.uml.edu\n- Austin Rotker: austin_rotker@student.uml.edu\n- Gilberto E. Alas: gilberto\\_alas@student.uml.edu\n\n## Contributing\n\nPull requests are welcome. For major changes, please open an [issue](https://github.com/dpploy/cortix/issues) first to discuss what you would like to change.\n\nPlease make sure to update tests as appropriate.\n\n## Location \n\nCortix Group\n\nc/o [UMass Innovation Hub](https://www.uml.edu/Innovation-Hub/)\n\n110 Canal St., 3rd Floor\n\nLowell, MA  01852\n\n\n",
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