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        "description": "\nCoimbra Chamber\n===============\n\n|build| |codecov| |license|\n\n.. image:: images/coimbra_ucsd_logo.png\n\nTable of Contents\n-----------------\n\n  * `Description`_\n  * `Installation`_\n  * `Getting Started`_\n  * `Python Version`_\n  * `MySQL Database`_\n  * `Preferred Way to Run Tests`_\n  * `Images`_\n\nDescription\n-----------\n\nBack to `Table of Contents`_\n\nDescription will go here.\n\nInstallation\n------------\n\nRun the following to install:\n\n.. code-block:: bash\n\n    $ pip install coimbra_chamber\n\nGetting Started\n---------------\n\nBack to `Table of Contents`_\n\nWe must configure our database before running any analysis:\n\nFirst, we must decide if we want to use an in-memory SQLite database or point to an instance of a MySQL database.\nThen we need to create a config file in our working directory to reflect our configuration.\n\nCreate a copy of the file `example-config.ini` from the repository and rename it to `config.ini`.\nMove the `config.ini` file that we just created into your working directory and open the file.\nChange database_type to `memory` if we chose an in-memory database above.\nOtherwise, leave the database_type as `MySQL` and replace the `host`, `user`, and `password` fields with the host, username, and password for MySQL database we choose.\n\nThen, to run an analysis:\n\n.. code-block:: python\n\n    >>> import coimbra_chamber as cc\n    >>> manager = cc.DataManager()\n    >>> manager.run()\n\nFollow the prompts in the terminal to complete your analysis.\n\nPython Version\n--------------\n\nBack to `Table of Contents`_\n\nThis module is intended to use Python 3.6. and above.\n\n\nMySQL Database\n------------------------------------------\n\nBack to `Table of Contents`_\n\nNOTE: In order to run the integration tests, a local version of mySQL must be\ninstalled and running.\n\nOn OSX you can run the following line to start the mySQL service after\ninstalling from LINK\n\n.. code-block:: bash\n\n    $ sudo launchctl load -F /Library/LaunchDaemons/com.oracle.oss.mysql.mysqld.plist\n\nStopping the mySQL service:\n\n.. code-block:: bash\n\n    $ sudo launchctl unload -F /Library/LaunchDaemons/com.oracle.oss.mysql.mysqld.plist\n\n\nPreferred Way to Run Tests\n---------------------------\n\nBack to `Table of Contents`_\n\n1. From the repo directory; i.e., coimbra_chamber\n.. code-block:: bash\n\n    $ python -m pytest tests -xv  --cov=coimbra_chamber --cov-report html tests\n\nThe above line requires both `pytest` and `pytest-cov` are installed.\n\n\nImages\n------\n\nBack to `Table of Contents`_\n\n.. image:: images/chamber_iso_view.jpg\n\n.. image:: images/chamber_scale.jpg\n\n.. image:: images/chamber_profile.jpg\n\n.. image:: images/chamber_optics.jpg\n\n\n.. |build| image:: https://travis-ci.com/rinman24/coimbra_chamber.svg?branch=master\n    :alt: Build Status\n    :scale: 100%\n    :target: https://travis-ci.com/rinman24/coimbra_chamber\n\n.. |codecov| image:: https://codecov.io/gh/rinman24/coimbra_chamber/branch/master/graph/badge.svg\n    :alt: Code Coverage Badge\n    :scale: 100%\n    :target: https://codecov.io/gh/rinman24/coimbra_chamber\n\n.. |license| image:: https://img.shields.io/badge/License-MIT-yellow.svg\n    :alt: License Badge\n    :scale: 100%\n    :target: https://opensource.org/licenses/MIT\n\n\n",
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