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        "author": "Brent Pedersen",
        "author_email": "bpederse@gmail.com",
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            "Programming Language :: Python :: 2",
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        "description": "Cigar\n=====\n\ncigar is a simple library for dealing with cigar strings. the most useful\nfeature now is soft-masking from left or right. This allows one to adjust\na SAM record only by changing the cigar string to soft-mask a number of bases\nsuch that the rest of the SAM record (pos, tlen, etc.) remain valid, but\ndownstream tools will not consider the soft-masked bases in further analysis.\n\n\n```Python\n>>> from cigar import Cigar\n\n>>> c = Cigar('100M')\n>>> len(c)\n100\n>>> str(c)\n'100M'\n>>> list(c.items())\n[(100, 'M')]\n\n\n>>> c = Cigar('20H20M20S')\n>>> len(c)\n40\n>>> str(c)\n'20H20M20S'\n>>> list(c.items())\n[(20, 'H'), (20, 'M'), (20, 'S')]\n\n>>> c.mask_left(29).cigar, c.cigar\n('20H9S11M20S', '20H20M20S')\n\n>>> c = Cigar('10M20S10M')\n>>> c.mask_left(10).cigar\n'30S10M'\n>>> c.mask_left(9).cigar\n'9S1M20S10M'\n>>> Cigar('10S').mask_left(10).cigar\n'10S'\n>>> Cigar('10H').mask_left(10).cigar\n'10H'\n>>> Cigar('10H').mask_left(11).cigar\n'10H'\n>>> Cigar('10H').mask_left(9).cigar\n'10H'\n\n>>> Cigar('1M10H').mask_left(9).cigar\n'1S10H'\n\n>>> Cigar('5M10H').mask_left(9).cigar\n'5S10H'\n\n>>> c = Cigar('1S1H1S5H1S5M10H')\n>>> c.mask_left(9).cigar == c.cigar\nTrue\n\n>>> c = Cigar('1S1H1S5H1S5M10H')\n>>> c.mask_right(9).cigar == c.cigar\nTrue\n>>> c.mask_right(11).cigar\n'1S1H1S5H1S4M1S10H'\n\n```\n\nInstallation\n============\n\n    pip install cigar",
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