{
    "info": {
        "author": "Ye Chang",
        "author_email": "yech1990@gmail.com",
        "bugtrack_url": null,
        "classifiers": [
            "Development Status :: 3 - Alpha",
            "Intended Audience :: Developers",
            "License :: OSI Approved :: MIT License",
            "Programming Language :: Python :: 3.6",
            "Programming Language :: Python :: 3.7",
            "Programming Language :: Python :: 3.8",
            "Topic :: Software Development :: Build Tools"
        ],
        "description": "# cfutils\n\n**Chromatogram File Utils**\n\nfor sanger sequencing data visualizing, alignment, mutation calling, and trimming etc.\n\n## Demo\n\n![plot chromatogram with mutation](https://raw.githubusercontent.com/yech1990/cfutils/master/data/plot.png)\n\n> command to generate demo above\n\n```bash\ncfutils mut --query ./data/B5-M13R_B07.ab1 --subject ./data/ref.fa --outdir ./data/ --plot\n```\n\n## How to install?\n\n### form pypi\n\n*(use this way ONLY, if you don't know what't going on)*\n\n```bash\npip install cfutils\n```\n\n### manipulate the source code\n\nclone from github\n\n```bash\ngit clone git@github.com:yech1990/cfutils.git \n```\n\ninstall dependance\n\n```bash\nmake init\n```\n\ndo unittest\n\n```bash\nmake test\n```\n\n## How to use?\n\nin command line\n\n```bash\ncfutils mut --help\n```\n\nas python module\n\n```python\nimport cfutils as cf\n```\n\n## ChangeLog\n\n- build as python package for pypi\n- fix bug that highlihgting wrong base\n\n## TODO\n\n- [ ] call mutation by alignment and plot Chromatogram graphic\n- [ ] add a doc\n- [x] change xaxis by peak location\n- [ ] fix bug that chromatogram switch pos after trim\n- [x] wrap as a cli app\n- [ ] return quality score in output\n- [ ] fix issue that selected base is not in the middle\n- [ ] fix plot_chromatograph rendering bug\n\n- [ ] add projection feature to make align and assemble possible",
        "description_content_type": "text/markdown",
        "docs_url": null,
        "download_url": "",
        "downloads": {
            "last_day": -1,
            "last_month": -1,
            "last_week": -1
        },
        "home_page": "https://github.com/pypa/cfutils",
        "keywords": "Utils Sanger Chromatogram",
        "license": "",
        "maintainer": "",
        "maintainer_email": "",
        "name": "cfutils",
        "package_url": "https://pypi.org/project/cfutils/",
        "platform": "",
        "project_url": "https://pypi.org/project/cfutils/",
        "project_urls": {
            "Bug Reports": "https://github.com/pypa/cfutils/issues",
            "Homepage": "https://github.com/pypa/cfutils",
            "Source": "https://github.com/pypa/cfutils/"
        },
        "release_url": "https://pypi.org/project/cfutils/0.0.0.dev48/",
        "requires_dist": null,
        "requires_python": "",
        "summary": "Chromatogram File Utils",
        "version": "0.0.0.dev48"
    },
    "last_serial": 5898963,
    "releases": {
        "0.0.0.dev1": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "e3c0a6a9abfbe52a4233c7de95fb4a05",
                    "sha256": "4ca7ffdb94b80ec15acbe814093fab714d7399f32382712540054fd76261bb94"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev1.tar.gz",
                "has_sig": false,
                "md5_digest": "e3c0a6a9abfbe52a4233c7de95fb4a05",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 4621,
                "upload_time": "2018-05-13T06:31:26",
                "url": "https://files.pythonhosted.org/packages/a1/b7/237773fbf02bf7e1f5bbbb04fb8fe668aaaf9b4f0a9ed4c6d843d4358dc5/cfutils-0.0.0.dev1.tar.gz"
            }
        ],
        "0.0.0.dev18": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "31a3abfc727c69621c99c32e806f0516",
                    "sha256": "1100dcfb6dc08affda70219b119de2de388fbf2675ac155c83b4a1a7d719a7e5"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev18.tar.gz",
                "has_sig": false,
                "md5_digest": "31a3abfc727c69621c99c32e806f0516",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 382903,
                "upload_time": "2018-05-15T05:27:35",
                "url": "https://files.pythonhosted.org/packages/c7/7c/cdc7c0ea39acfc3442ac08390f1b827ae76a8a8bfe8ee4d533cb602fddf3/cfutils-0.0.0.dev18.tar.gz"
            }
        ],
        "0.0.0.dev20": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "e57eff7efd584e4eca8e32dd674a978d",
                    "sha256": "cea8db4d7331e318e14250c4128d85ed30f4b492bbd621cbc1107eaebae3dcd0"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev20.tar.gz",
                "has_sig": false,
                "md5_digest": "e57eff7efd584e4eca8e32dd674a978d",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 14368059,
                "upload_time": "2018-05-15T06:14:33",
                "url": "https://files.pythonhosted.org/packages/16/f7/9d3f62c00c13ac9d0408cbc96c514c50f597f9379708d2b0ce26c17d8d7c/cfutils-0.0.0.dev20.tar.gz"
            }
        ],
        "0.0.0.dev27": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "c941cc9f9c747eadf7ec9ea14e8000ac",
                    "sha256": "9c32fbea7d6316d1b41c124e50362f45ca436ff0408c154a6f12aeb53228976c"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev27.tar.gz",
                "has_sig": false,
                "md5_digest": "c941cc9f9c747eadf7ec9ea14e8000ac",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 384456,
                "upload_time": "2018-05-15T15:38:25",
                "url": "https://files.pythonhosted.org/packages/4e/33/0cf5cb2a3f9d61fe51e16f851f7227ffbdd14218ce0d390e0e99a70912d4/cfutils-0.0.0.dev27.tar.gz"
            }
        ],
        "0.0.0.dev3": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "82621aea23cc70f1299b24b883a19d81",
                    "sha256": "47ad3884f81a7e755fb8505ef7c5bf0ba452413682369b58cc003bac87e79f86"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev3.tar.gz",
                "has_sig": false,
                "md5_digest": "82621aea23cc70f1299b24b883a19d81",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 4617,
                "upload_time": "2018-05-13T07:15:20",
                "url": "https://files.pythonhosted.org/packages/e3/a0/c748dd0d85bf620cb2d4081368bd0614b7a79ba3d6a2d5a65217d3cad6ce/cfutils-0.0.0.dev3.tar.gz"
            }
        ],
        "0.0.0.dev30": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "251eddd248fbc03970b4473cf9f83daa",
                    "sha256": "20bb77600b0775390b52751818b5fb6843ff1aa9d1a24f66b1c9803206b28c70"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev30.tar.gz",
                "has_sig": false,
                "md5_digest": "251eddd248fbc03970b4473cf9f83daa",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 371582,
                "upload_time": "2018-05-16T06:52:10",
                "url": "https://files.pythonhosted.org/packages/6d/81/9a0ec6b669fe17bc503516d83aba480a0d647a5009b1b0eb28593bf36d08/cfutils-0.0.0.dev30.tar.gz"
            }
        ],
        "0.0.0.dev33": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "3b0ea2ca7eb7f4d84bca3196bf48a54d",
                    "sha256": "a017b911258d1d145a65ed75dd4feaf091e3316e01f610294ed81b68a9eec3c1"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev33.tar.gz",
                "has_sig": false,
                "md5_digest": "3b0ea2ca7eb7f4d84bca3196bf48a54d",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 371818,
                "upload_time": "2018-05-16T12:26:53",
                "url": "https://files.pythonhosted.org/packages/b3/63/b1173a572f41e38194cce7ccae0bca41ce9ab4a120ad3e446264d35e73da/cfutils-0.0.0.dev33.tar.gz"
            }
        ],
        "0.0.0.dev37": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "f336f66da2790d795022a7139daaf554",
                    "sha256": "4bc830b051cb4700bfff109b27b88accf575a5402fef6dab0632accd5db33d89"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev37.tar.gz",
                "has_sig": false,
                "md5_digest": "f336f66da2790d795022a7139daaf554",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 372063,
                "upload_time": "2018-07-01T12:55:55",
                "url": "https://files.pythonhosted.org/packages/d0/7b/a9c36cce82ca586b673422df8753c06b09f27c6df5875def06f5551a58b3/cfutils-0.0.0.dev37.tar.gz"
            }
        ],
        "0.0.0.dev40": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "06100560f0d95038f72ef5f8aec43c02",
                    "sha256": "279f3c3c6db8ed470fe407669d341f1f5b951cf612b8786774ec1f90086bf3a2"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev40.tar.gz",
                "has_sig": false,
                "md5_digest": "06100560f0d95038f72ef5f8aec43c02",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 583024,
                "upload_time": "2019-05-28T06:49:25",
                "url": "https://files.pythonhosted.org/packages/6b/a1/4b086613bfd535767dcb6bc19a259729131f6f0112c70d791d1ef7904b09/cfutils-0.0.0.dev40.tar.gz"
            }
        ],
        "0.0.0.dev41": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "b9be58a865af48683b2a462b26eacfd2",
                    "sha256": "c706061d5fa52aac52142882f0a00239b153b5f9a552571a48204b1bb93e61a7"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev41.tar.gz",
                "has_sig": false,
                "md5_digest": "b9be58a865af48683b2a462b26eacfd2",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 583784,
                "upload_time": "2019-06-21T12:24:37",
                "url": "https://files.pythonhosted.org/packages/e2/f9/a0bfbfe4187b754c204945f862c0ed7bec25f578119b3014af785524afa0/cfutils-0.0.0.dev41.tar.gz"
            }
        ],
        "0.0.0.dev44": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "103038885583f5fb954f00dae177a757",
                    "sha256": "9a3bc9df3d56371200d63ea492dd179782a9d38cc4aa28476bfa80297a58e44d"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev44.tar.gz",
                "has_sig": false,
                "md5_digest": "103038885583f5fb954f00dae177a757",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 583864,
                "upload_time": "2019-09-25T06:41:38",
                "url": "https://files.pythonhosted.org/packages/41/66/6165a160ac8ec57ef30d399c869083f2717e0690cbbf02468788572b30ca/cfutils-0.0.0.dev44.tar.gz"
            }
        ],
        "0.0.0.dev45": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "9ee5e4a586144f26bc7ba3bc9adf62de",
                    "sha256": "fd0a54ac81ff3988076968702484f57675b8ce93db0f78c1601c7f92ccfd077c"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev45.tar.gz",
                "has_sig": false,
                "md5_digest": "9ee5e4a586144f26bc7ba3bc9adf62de",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 584083,
                "upload_time": "2019-09-25T19:05:53",
                "url": "https://files.pythonhosted.org/packages/e2/5a/60ed559b7fdf849b918a84866c91307468cd3c052ce008bb09859c606339/cfutils-0.0.0.dev45.tar.gz"
            }
        ],
        "0.0.0.dev46": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "d8a23916cc0d66b27c3d28f49ee35dca",
                    "sha256": "e005dd88cc953fe5eca9eb2dda1ed0f158f740e500831368c5583255ff21a0ff"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev46.tar.gz",
                "has_sig": false,
                "md5_digest": "d8a23916cc0d66b27c3d28f49ee35dca",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 584045,
                "upload_time": "2019-09-26T04:38:08",
                "url": "https://files.pythonhosted.org/packages/f5/4f/ddb8f3f91d97d5a065512afa65186a7634c9433d04c53c33deea224a19c7/cfutils-0.0.0.dev46.tar.gz"
            }
        ],
        "0.0.0.dev47": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "e3224e15bd92dd5e21107b9e09203125",
                    "sha256": "729d65c3c7266a78fc68f7e6a766aec62d1562aa442347704380f6233e0740ed"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev47.tar.gz",
                "has_sig": false,
                "md5_digest": "e3224e15bd92dd5e21107b9e09203125",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 584098,
                "upload_time": "2019-09-26T05:24:02",
                "url": "https://files.pythonhosted.org/packages/3f/86/52ea377349dca059ad8dce9a7d9e5bf5ada6f4c474721fe08c984862b274/cfutils-0.0.0.dev47.tar.gz"
            }
        ],
        "0.0.0.dev48": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "438b4d40bb5a376d6257c7763c934e3b",
                    "sha256": "d927100614a413747be190e1bf6ea2dca15d2f560ae251a6ac39be4ba7caeaa3"
                },
                "downloads": -1,
                "filename": "cfutils-0.0.0.dev48.tar.gz",
                "has_sig": false,
                "md5_digest": "438b4d40bb5a376d6257c7763c934e3b",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 584135,
                "upload_time": "2019-09-28T05:13:11",
                "url": "https://files.pythonhosted.org/packages/34/2d/c47709570e565c612d01b6ecdf14df731704b20c0936645d5127e1ddb7d9/cfutils-0.0.0.dev48.tar.gz"
            }
        ]
    },
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "md5": "438b4d40bb5a376d6257c7763c934e3b",
                "sha256": "d927100614a413747be190e1bf6ea2dca15d2f560ae251a6ac39be4ba7caeaa3"
            },
            "downloads": -1,
            "filename": "cfutils-0.0.0.dev48.tar.gz",
            "has_sig": false,
            "md5_digest": "438b4d40bb5a376d6257c7763c934e3b",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": null,
            "size": 584135,
            "upload_time": "2019-09-28T05:13:11",
            "url": "https://files.pythonhosted.org/packages/34/2d/c47709570e565c612d01b6ecdf14df731704b20c0936645d5127e1ddb7d9/cfutils-0.0.0.dev48.tar.gz"
        }
    ]
}