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        "author": "Kent Kawashima",
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        "description": "# bseq\nPython package for handling biological sequences and alignments\n\n# Quickstart\n\n## Install bseq\n```bash\npip install bseq\n```\n\n## Nucleotide sequence into FASTA format\n```python\nfrom bseq.sequence import NuclSequence\nseq = NuclSequence('test_seq_name', 'GATTACA', description='Test nucleotide sequence')\nprint(seq.fasta_format())\n```\n\n## Import alignment from file\n```python\nfrom bseq.reader import read_fasta_alignment\naln = read_fasta_alignment('/Users/Me/Downloads/seq.aln.fasta', \n                           seq_type='nucleotide', name='test_alignment', \n                           description='Test alignment for bseq')\n```\n\n# Overview\nbseq helps biologists import and manipulate biological sequences such as nucleotides,\namino acids, and codons. Unlike other bioinformatics packages in Python, bseq solely focuses\non analyzing and manipulating sequences and alignments.\n\n# Dependencies\nbseq uses [numpy](http://www.numpy.org) for many alignment operations, and [nose](https://nose.readthedocs.io/en/latest/) to test its source code. When using `pip` to install `bseq`, pip will automatically install `numpy` and `nose`.\n\n\n",
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