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        "author": "Matthew A. Clapp",
        "author_email": "itsayellow+dev@gmail.com",
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            "Development Status :: 3 - Alpha",
            "Intended Audience :: Developers",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: MIT License",
            "Programming Language :: Python :: 3",
            "Topic :: Multimedia :: Graphics",
            "Topic :: Scientific/Engineering :: Bio-Informatics",
            "Topic :: Scientific/Engineering :: Medical Science Apps."
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        "description": "================\nbiorad1sc_reader\n================\n\nPython Package to read, parse, convert \\*.1sc files generated by Bio-Rad\nQuantity One software.\n\nDocumentation at: http://biorad1sc-reader.readthedocs.io/\n\nAn optional dependency: **numpy**.  If present, image operations in\nbiorad1sc_reader will run 4x to 5x faster.\n\nAlso installs the following command-line executables:\n\n``bio1sc2tiff``\n    converts \\*.1sc files to \\*.tif images. (type ``bio1sc2tiff --help``)\n``bio1scmeta``\n    reports all metadata contained in each \\*.1sc file to a text file.\n    (type ``bio1scmeta --help``)\n``bio1scread``\n    reports details on a \\*.1sc file's internal structure.\n    (type ``bio1scread --help``)\n\n**************\nCurrent Status\n**************\n\n* \"Alpha\" quality software\n\n  * API subject to change\n  * No known problems in operation.\n\n* Reading Image Data OK\n* Saving Image from file to new TIFF file OK\n\n  * Reader.save_img_as_tiff()\n  * Reader.save_img_as_tiff_sc()\n\n* Reading all metadata OK\n\n  * Reader.get_metadata()\n  * Reader.get_metadata_compact()\n\n* Reading certain image Metadata from Data Block 7 OK\n\n  * Reader.get_img_summary()\n  * Includes:\n\n    * Scanner Name: <Scanner Name>\n    * Number of Pixels: (<img_size_x> x <img_size_y>)\n    * Image Area: (<img_size_x> mm x <img_size_y> mm)\n    * Scan Memory Size: <total_img_size> Kb\n    * Old file name: <old_file_name>\n    * New file name: <new_file_name>\n    * <File Directory>\n    * New Image Acquired\n    * Save As...\n    * Quantity One <Quantity One Version String>\n\n* python2 (lack of) support\n\n  * I'm currently unwilling to support python2\n  * If you'd like python2 support, it's DIY. :)\n\n********\nExamples\n********\n\n::\n\n    # setup reader with input file\n    import bio1sc_reader\n    myreader = bio1sc_reader.Reader(\"my_biorad_file.1sc\")\n\n    # get list/dict of all metadata in 1sc file\n    my_img_metadata = myreader.get_metadata()\n\n    # get a more succinct data structure of all metadata in 1sc file\n    my_img_metadata = myreader.get_metadata_compact()\n\n    # get a quick summary of some metadata about the image in the 1sc file\n    my_img_metadata = myreader.get_img_summary()\n\n    # Different options for writing image data out as a TIFF file\n    myreader.save_img_as_tif(\"unscaled_brightness.tif\")\n    myreader.save_img_as_tif(\"unscaled_inverted_brightness.tif\", invert=True)\n    myreader.save_img_as_tif_sc(\"scaled_brightness.tif\")\n    myreader.save_img_as_tif_sc(\"scaled_brightness_more.tif\", scale=0.8)\n    myreader.save_img_as_tif_sc(\"scaled_inverted_brightness.tif\", invert=True)\n\n**************************\nFile Format Documentation\n**************************\n\n* `File Specification for Bio-Rad 1sc files <http://biorad1sc-doc.readthedocs.io/>`_\n\n************\nRelated Info\n************\n* `Bio-Rad Image Lab Software <http://www.bio-rad.com/en-cn/product/image-lab-software>`_\n\n  * For Mac, only version 5.x supports 1sc files. (Click on the Download tab to find it.)\n\n* `Bio-Rad Quantity One Software <http://www.bio-rad.com/en-cn/product/quantity-one-1-d-analysis-software>`_\n\n  * Generates 1sc files from Bio-Rad instruments.\n\n* `Bio Formats: Bio-Rad Gel 1sc file format <https://docs.openmicroscopy.org/bio-formats/5.6.0/formats/bio-rad-gel.html>`_\n* `BioRadGelReader.java source <https://github.com/openmicroscopy/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/BioRadGelReader.java>`_\n* `Forum post: Bio-Format 1sc to jpg batch conversion <https://www.openmicroscopy.org/community/viewtopic.php?f=13&t=2400>`_\n* `reStructuredText Syntax <http://docutils.sourceforge.net/rst.html>`_\n\n\n",
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