{ "info": { "author": "Daniel Standage", "author_email": "daniel.standage@gmail.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Environment :: Console", "License :: OSI Approved :: MIT License", "Programming Language :: Python :: 3.5", "Programming Language :: Python :: 3.6", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "[![kevlar build status][travisbadge]](https://travis-ci.org/dib-lab/kevlar)\n[![PyPI version][pypibadge]](https://pypi.python.org/pypi/biokevlar)\n[![Test coverage][codecovbadge]](https://codecov.io/github/dib-lab/kevlar)\n[![kevlar documentation][rtdbadge]](http://kevlar.readthedocs.io/en/latest/?badge=latest)\n[![Docker build status][dockerbadge]](https://quay.io/repository/dib-lab/kevlar)\n[![MIT licensed][licensebadge]](https://github.com/dib-lab/kevlar/blob/master/LICENSE)\n\n\"\n\n# kevlar\n\nDaniel Standage, 2016-2019 \nhttps://kevlar.readthedocs.io\n\nWelcome to **kevlar**, software for predicting *de novo* genetic variants without mapping reads to a reference genome!\nkevlar's *k*-mer abundance based method calls single nucleotide variants (SNVs), multinucleotide variants (MNVs), insertion/deletion variants (indels), and structural variants (SVs) simultaneously with a single simple model.\nThis software is free for use under the MIT license.\n\n
\n Where can I find kevlar online?\n \n\n If you have questions or need help with kevlar, the [GitHub issue tracker](https://github.com/dib-lab/kevlar) should be your first point of contact.\n
\n\n
\n How do I install kevlar?\n\n See [the kevlar documentation](http://kevlar.readthedocs.io/en/latest/install.html) for complete instructions, but the impatient can try the following.\n\n ```\n pip3 install git+https://github.com/dib-lab/khmer.git\n pip3 install biokevlar\n ```\n
\n\n
\n How do I use kevlar?\n \n
\n\n
\n How can I contribute?\n \n We welcome contributions to the kevlar project from the community!\n If you're interested in modifying kevlar or contributing to its ongoing development, feel free to send us a message or submit a pull request!\n\n The kevlar software is a project of the [Lab for Data Intensive Biology](http://ivory.idyll.org/lab/) and the [Computational Genomics Lab](http://www.hormozdiarilab.org/) at UC Davis.\n
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