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        "author": "Daniel Domingo-Fern\u00e1ndez and Charles Tapley Hoyt",
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            "License :: OSI Approved :: MIT License",
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            "Programming Language :: Python",
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        "description": "Bio2BEL KEGG |build| |coverage| |documentation| |zenodo|\n========================================================\nThis package allows the enrichment of BEL networks with KEGG information by wrapping its RESTful API.\nFurthermore, it is integrated in the `ComPath environment <https://github.com/ComPath>`_ for pathway database comparison.\n\nInstallation |pypi_version| |python_versions| |pypi_license|\n------------------------------------------------------------\n``bio2bel_kegg`` can be installed easily from `PyPI <https://pypi.python.org/pypi/bio2bel_kegg>`_ with the\nfollowing code in your favorite terminal:\n\n.. code-block:: sh\n\n    $ python3 -m pip install bio2bel_kegg\n\nor from the latest code on `GitHub <https://github.com/bio2bel/kegg>`_ with:\n\n.. code-block:: sh\n\n    $ python3 -m pip install git+https://github.com/bio2bel/kegg.git@master\n\nSetup\n-----\nKEGG can be downloaded and populated from either the Python REPL or the automatically installed command line utility.\n\nThe following resources will be automatically installed and loaded in order to fully populate the tables of the\ndatabase:\n\n- `Bio2BEL HGNC <https://github.com/bio2bel/hgnc>`_\n\nPython REPL\n~~~~~~~~~~~\n.. code-block:: python\n\n    >>> import bio2bel_kegg\n    >>> kegg_manager = bio2bel_kegg.Manager()\n    >>> kegg_manager.populate()\n\nCommand Line Utility\n~~~~~~~~~~~~~~~~~~~~\n.. code-block:: bash\n\n    bio2bel_kegg populate\n\nOther Command Line Utilities\n----------------------------\n- Run an admin site for simple querying and exploration :code:`python3 -m bio2bel_kegg web` (http://localhost:5000/admin/)\n- Export gene sets for programmatic use :code:`python3 -m bio2bel_kegg export`\n\nCitation\n--------\n- Kanehisa, Furumichi, M., Tanabe, M., Sato, Y., and Morishima, K.; KEGG: new perspectives on genomes,\n  pathways, diseases and drugs. Nucleic Acids Res. 45, D353-D361 (2017).\n- Kanehisa, M., Sato, Y., Kawashima, M., Furumichi, M., and Tanabe, M.; KEGG as a reference resource\n  for gene and protein annotation. Nucleic Acids Res. 44, D457-D462 (2016).\n- Kanehisa, M. and Goto, S.; KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 28, 27-30 (2000).\n\n.. |build| image:: https://travis-ci.org/bio2bel/kegg.svg?branch=master\n    :target: https://travis-ci.org/bio2bel/kegg\n    :alt: Build Status\n\n.. |coverage| image:: https://codecov.io/gh/bio2bel/kegg/coverage.svg?branch=master\n    :target: https://codecov.io/gh/bio2bel/kegg?branch=master\n    :alt: Coverage Status\n\n.. |documentation| image:: http://readthedocs.org/projects/bio2bel-interpro/badge/?version=latest\n    :target: http://bio2bel.readthedocs.io/projects/kegg/en/latest/?badge=latest\n    :alt: Documentation Status\n\n.. |climate| image:: https://codeclimate.com/github/bio2bel/kegg/badges/gpa.svg\n    :target: https://codeclimate.com/github/bio2bel/kegg\n    :alt: Code Climate\n\n.. |python_versions| image:: https://img.shields.io/pypi/pyversions/bio2bel_kegg.svg\n    :alt: Stable Supported Python Versions\n\n.. |pypi_version| image:: https://img.shields.io/pypi/v/bio2bel_kegg.svg\n    :alt: Current version on PyPI\n\n.. |pypi_license| image:: https://img.shields.io/pypi/l/bio2bel_kegg.svg\n    :alt: MIT License\n\n.. |zenodo| image:: https://zenodo.org/badge/105248163.svg\n    :target: https://zenodo.org/badge/latestdoi/105248163",
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