{ "info": { "author": "Charles Tapley Hoyt", "author_email": "charles.hoyt@scai.fraunhofer.de", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Environment :: Console", "Intended Audience :: Developers", "Intended Audience :: Science/Research", "License :: OSI Approved :: MIT License", "Operating System :: OS Independent", "Programming Language :: Python", "Programming Language :: Python :: 3.6", "Programming Language :: Python :: 3.7", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "Bio2BEL InterPro |build| |coverage| |documentation| |zenodo|\n============================================================\nConverts the InterPro protein families, domains, and other classes to ontological relations in BEL.\n\nInstallation |pypi_version| |python_versions| |pypi_license|\n------------------------------------------------------------\n``bio2bel_interpro`` can be installed easily from `PyPI `_ with the\nfollowing code in your favorite terminal:\n\n.. code-block:: sh\n\n $ python3 -m pip install bio2bel_interpro\n\nor from the latest code on `GitHub `_ with:\n\n.. code-block:: sh\n\n $ python3 -m pip install git+https://github.com/bio2bel/interpro.git@master\n\nSetup\n-----\nInterPro can be downloaded and populated from either the Python REPL or the automatically installed command line\nutility.\n\nPython REPL\n~~~~~~~~~~~\n.. code-block:: python\n\n >>> import bio2bel_interpro\n >>> interpro_manager = bio2bel_interpro.Manager()\n >>> interpro_manager.populate()\n\nCommand Line Utility\n~~~~~~~~~~~~~~~~~~~~\n.. code-block:: bash\n\n bio2bel_interpro populate\n\nProgrammatic Interface\n----------------------\nTo enrich the proteins in a BEL Graph with their InterPro entries (families, domains, sites, etc.) , use:\n\n>>> from bio2bel_interpro import enrich_proteins\n>>> graph = ... # get a BEL graph\n>>> enrich_proteins(graph)\n\n.. |build| image:: https://travis-ci.org/bio2bel/interpro.svg?branch=master\n :target: 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