{ "info": { "author": "Charles Tapley Hoyt", "author_email": "charles.hoyt@scai.fraunhofer.de", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Environment :: Console", "Intended Audience :: Developers", "Intended Audience :: Science/Research", "License :: OSI Approved :: MIT License", "Operating System :: OS Independent", "Programming Language :: Python", "Programming Language :: Python :: 3.6", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "Bio2BEL GO |build| |coverage| |documentation|\n=============================================\nConverts the Gene Ontology (GO) to BEL\n\nInstallation |pypi_version| |python_versions| |pypi_license|\n------------------------------------------------------------\n``bio2bel_go`` can be installed easily from `PyPI `_ with\nthe following code in your favorite terminal:\n\n.. code-block:: sh\n\n $ python3 -m pip install bio2bel_go\n\nor from the latest code on `GitHub `_ with:\n\n.. code-block:: sh\n\n $ python3 -m pip install git+https://github.com/bio2bel/go.git@master\n\nSetup\n-----\nGO can be downloaded and populated from either the Python REPL or the automatically installed command line\nutility.\n\nPython REPL\n~~~~~~~~~~~\n.. code-block:: python\n\n >>> import bio2bel_go\n >>> go_manager = bio2bel_go.Manager()\n >>> go_manager.populate()\n\nCommand Line Utility\n~~~~~~~~~~~~~~~~~~~~\n.. code-block:: bash\n\n bio2bel_go populate\n\nCitation\n--------\n- Ashburner, M., *et al.* (2000). `Gene ontology: tool for the unification of biology `_.\n The Gene Ontology Consortium. Nature Genetics, 25(1), 25\u20139.\n\nLinks\n-----\n- http://geneontology.org/page/ontology-documentation\n\n.. |build| image:: https://travis-ci.org/bio2bel/go.svg?branch=master\n :target: https://travis-ci.org/bio2bel/go\n :alt: Build Status\n\n.. |documentation| image:: http://readthedocs.org/projects/bio2bel-go/badge/?version=latest\n :target: http://bio2bel.readthedocs.io/projects/go/en/latest/?badge=latest\n :alt: Documentation Status\n\n.. |pypi_version| image:: https://img.shields.io/pypi/v/bio2bel_go.svg\n :alt: Current version on PyPI\n\n.. |coverage| image:: https://codecov.io/gh/bio2bel/go/coverage.svg?branch=master\n :target: https://codecov.io/gh/bio2bel/go?branch=master\n :alt: Coverage Status\n\n.. |climate| image:: https://codeclimate.com/github/bio2bel/go/badges/gpa.svg\n :target: https://codeclimate.com/github/bio2bel/go\n :alt: Code Climate\n\n.. |python_versions| image:: https://img.shields.io/pypi/pyversions/bio2bel_go.svg\n :alt: Stable Supported Python Versions\n\n.. |pypi_license| image:: https://img.shields.io/pypi/l/bio2bel_go.svg\n :alt: MIT License\n\n\n", "description_content_type": "", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/bio2bel/go", "keywords": "Biological Expression Language,BEL,Systems Biology,Networks Biology,Gene Ontology", "license": "MIT License", "maintainer": "Charles Tapley Hoyt", "maintainer_email": "charles.hoyt@scai.fraunhofer.de", "name": "bio2bel-go", "package_url": "https://pypi.org/project/bio2bel-go/", "platform": "", "project_url": "https://pypi.org/project/bio2bel-go/", "project_urls": { "Homepage": "https://github.com/bio2bel/go" }, "release_url": "https://pypi.org/project/bio2bel-go/0.0.1/", "requires_dist": [ "networkx (>=2.1)", "pybel (<0.13.0,>=0.12.0)", "obonet", "click", "bio2bel (>=0.1.3)", "tqdm", "sqlalchemy" ], "requires_python": "", "summary": "A package for converting GO to BEL", "version": "0.0.1" }, "last_serial": 4328213, "releases": { "0.0.1": [ { "comment_text": "", "digests": { "md5": "318e54b8e8260e8b19407b3b2cbc47fa", "sha256": "43a15e8248292cbbb41540a582a5f52c31d55a4e438f0d7fe69a217daa60a01e" }, "downloads": -1, "filename": "bio2bel_go-0.0.1-py3-none-any.whl", "has_sig": false, "md5_digest": "318e54b8e8260e8b19407b3b2cbc47fa", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 10405, "upload_time": "2018-10-01T12:48:44", "url": "https://files.pythonhosted.org/packages/f9/c2/977ecd3cca8e3a2e1752b098a05303391429212714211dd9104123c57cb2/bio2bel_go-0.0.1-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "4191f48c27951421288e0ac188bdfc19", "sha256": "709ba89478a8350518046b84470a5ef3bb7f1729e9b577f9aa3015a641cafd17" }, "downloads": -1, "filename": "bio2bel_go-0.0.1.tar.gz", "has_sig": false, "md5_digest": "4191f48c27951421288e0ac188bdfc19", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 14615, "upload_time": "2018-10-01T12:48:45", "url": "https://files.pythonhosted.org/packages/a4/cf/74e2bb897534e004922a6f9b93cb358779e84c37397d515168a60114b1ed/bio2bel_go-0.0.1.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "318e54b8e8260e8b19407b3b2cbc47fa", "sha256": "43a15e8248292cbbb41540a582a5f52c31d55a4e438f0d7fe69a217daa60a01e" }, "downloads": -1, "filename": "bio2bel_go-0.0.1-py3-none-any.whl", "has_sig": false, "md5_digest": "318e54b8e8260e8b19407b3b2cbc47fa", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 10405, "upload_time": "2018-10-01T12:48:44", "url": "https://files.pythonhosted.org/packages/f9/c2/977ecd3cca8e3a2e1752b098a05303391429212714211dd9104123c57cb2/bio2bel_go-0.0.1-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "4191f48c27951421288e0ac188bdfc19", "sha256": "709ba89478a8350518046b84470a5ef3bb7f1729e9b577f9aa3015a641cafd17" }, "downloads": -1, "filename": "bio2bel_go-0.0.1.tar.gz", "has_sig": false, "md5_digest": "4191f48c27951421288e0ac188bdfc19", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 14615, "upload_time": "2018-10-01T12:48:45", "url": "https://files.pythonhosted.org/packages/a4/cf/74e2bb897534e004922a6f9b93cb358779e84c37397d515168a60114b1ed/bio2bel_go-0.0.1.tar.gz" } ] }