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            "Programming Language :: Python :: 3.6",
            "Programming Language :: Python :: 3.7",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
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        "description": "# BenchlingAPI\n\n[![PyPI version](https://badge.fury.io/py/benchlingapi.svg)](https://badge.fury.io/py/benchlingapi)\n\nThe (unofficial) python API wrapper for Benchling. For more information,\nsee documentation at https://klavinslab.github.io/benchling-api/index.\n\n## Installation\n\n```\npip install benchlingapi -U\n```\n\n## Getting Started\n\nInitialize a session using your Benchling-provided API key:\n\n```python\nfrom benchlingapi import Session\nsession = Session(\"your_secret_benchling_api_key\")\n```\n\nFrom there, you can access various models:\n\n```python\nsession.DNASequence\nsession.AASequence\nsession.Oligo\nsession.Folder\nsession.Project\nsession.Registry\nsession.Translation\nsession.EntitySchema\nsession.Batch\nsession.CustomEntity\n```\n\nFinding models:\n\n```python\n# get one model\ndna = session.DNASequence.one()\n\n# find a specific model by its id\ndna = session.DNASequence.find('sdg_4tg23')\n\n# get the last 50 amino acids\nproteins = session.AASequence.last(50)\n\n# get a registry by name\nregistry = session.Registry.find_by_name(\"Klavins Lab Registry\")\n```\n\nUpdating models:\n\n```python\ndna = session.DNASequence.one()\ndna.name = \"My new name\"\ndna.bases = \"AGGTAGGGTAGGGCCAGAGA\"\n\n# update the sequence on the server\ndna.update()\n```\n\nSaving new models:\n\n```python\nfolder = session.Folder.find_by_name(\"My API Folder\")\ndna = session.DNASequence(\n    name = 'my new dna',\n    bases = 'AGGTAGGATGGCCA',\n    folder_id = folder.id,\n    is_circular = False\n)\n\n# save the dna to your Benchling account\ndna.save()\n```\n\nRegistering models to your registry:\n\n```python\ndna.set_schema(\"My DNA Schema\")\ndna.register()\n```\n\nSee the documentation for more information: https://klavinslab.github.io/benchling-api/index\n\n## Testing\n\nTesting is done using `pytest`. Tests will create live requests to a Benchling account.\nSince testing is done live, a Benchling account will need to be setup along with testing\ndata.\n\nTo run tests, you must have a Benchling Account with an API key. Tests require a file in\n'tests/secrets/config.json' with the following format:\n\n```\n{\n  \"credentials\": {\n    \"api_key\": \"asdahhjwrthsdfgadfadfgadadsfa\"\n  },\n  \"sharelinks\": [\n    \"https://benchling.com/s/seq-asdfadsfaee\"\n  ],\n  \"project\": {\n    \"name\": \"API\"\n  },\n  \"trash_folder\": {\n    \"name\": \"API_Trash\"\n  },\n  \"inventory_folder\": {\n    \"name\": \"API_Inventory\"\n  }\n}\n```\n\nOn the Benchling side of things, in the account liked to the `credentials[\"api_key\"]`, you must\nhave a project corresponding to the `project[\"name\"]` value above. Within this project, you should\nhave two folder corresponding to the `trash_folder` and `inventory_folder` values above. Additionally,\nyou should have at least one example of an AminoAcid, DNASequence, CustomEntity, and Oligo stored within\nyour `inventory_folder`. Tests will copy the examples from the `inventory_folder` for downstream tests.\nAfter the tests, conclude, inventory in the `trash_folder` will get archived.\n\n#### Happy Cloning!\n",
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