{ "info": { "author": "Roberto Preste", "author_email": "robertopreste@gmail.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Intended Audience :: Developers", "License :: OSI Approved :: MIT License", "Natural Language :: English", "Programming Language :: Python :: 3", "Programming Language :: Python :: 3.5", "Programming Language :: Python :: 3.6", "Programming Language :: Python :: 3.7", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "==========\napybiomart\n==========\n\n\n.. image:: https://img.shields.io/pypi/v/apybiomart.svg\n :target: https://pypi.python.org/pypi/apybiomart\n\n.. image:: https://www.repostatus.org/badges/latest/wip.svg\n :alt: Project Status: WIP \u2013 Initial development is in progress, but there has not yet been a stable, usable release suitable for the public.\n :target: https://www.repostatus.org/#wip\n\n.. image:: https://travis-ci.com/robertopreste/apybiomart.svg?branch=master\n :target: https://travis-ci.com/robertopreste/apybiomart\n :alt: Travis CI build status\n\n.. image:: https://circleci.com/gh/robertopreste/apybiomart.svg?style=svg\n :target: https://circleci.com/gh/robertopreste/apybiomart\n :alt: CircleCI build status\n\n.. image:: https://ci.appveyor.com/api/projects/status/40xnw7ww187taoif?svg=true\n :target: https://ci.appveyor.com/project/robertopreste/apybiomart\n :alt: AppVeyor build status\n\n.. image:: https://codecov.io/gh/robertopreste/apybiomart/branch/master/graph/badge.svg\n :target: https://codecov.io/gh/robertopreste/apybiomart\n :alt: Codecov status\n\n.. image:: https://readthedocs.org/projects/apybiomart/badge/?version=latest\n :target: https://apybiomart.readthedocs.io/en/latest/?badge=latest\n :alt: Documentation Status\n\n.. image:: https://pyup.io/repos/github/robertopreste/apybiomart/shield.svg\n :target: https://pyup.io/repos/github/robertopreste/apybiomart/\n :alt: Updates\n\n.. image:: https://pyup.io/repos/github/robertopreste/apybiomart/python-3-shield.svg\n :target: https://pyup.io/repos/github/robertopreste/apybiomart/\n :alt: Python 3\n\n.. image:: https://pepy.tech/badge/apybiomart\n :target: https://pepy.tech/project/apybiomart\n :alt: Downloads\n\n.. image:: https://img.shields.io/badge/Say%20Thanks-!-1EAEDB.svg\n :target: https://saythanks.io/to/robertopreste\n\n\nAsync pythonic interface to BioMart.\n\n\n* Free software: MIT license\n* Documentation: https://apybiomart.readthedocs.io\n* GitHub repo: https://github.com/robertopreste/apybiomart\n\n\nFeatures\n========\n\napybiomart is a Python module which provides a simple asynchronous interface to Ensembl BioMart_. Users can exploit the async interface to schedule multiple queries using all the commodities offered by Python's asyncio library.\n\nDepending on specific needs, apybiomart offers different entry points:\n\n* an asynchronous ``aquery()`` function, to schedule multiple queries in the same event loop;\n* a synchronous ``query()`` function, which can be used for exploratory queries, executed in real time;\n* a set of synchronous ``find_*()`` functions, which can be used to retrieve the list of available marts, datasets for a specific mart, attributes and filters for a specific dataset.\n\nPlease refer to the Usage_ section of the documentation for further information.\n\nBackground\n----------\n\napybiomart was originally born as a fork of the great pybiomart_ package.\n\nI was working on a project that employed a series of async calls to several online resources, but I couldn't manage to perform asynchronous calls to BioMart using that package, so I decided to modify it to better suit my needs. However, it gradually evolved into a very different thing: the original implementation was rewritten and the structure of the package changed a bit, in a way that I found most useful for my purpose.\n\nThis said, all the credits go to jrderuiter_, which created the original pybiomart_ package.\n\nInstallation\n============\n\n**apybiomart only supports Python 3**, and can be installed using pip::\n\n pip install apybiomart\n\nPlease refer to the Installation_ section of the documentation for further information.\n\nCredits\n=======\n\nThis package was created with Cookiecutter_ and the `cc-pypackage`_ project template.\n\n.. _BioMart: https://www.ensembl.org/biomart/martview\n.. _Usage: https://apybiomart.readthedocs.io/en/latest/usage.html\n.. _pybiomart: https://github.com/jrderuiter/pybiomart\n.. _jrderuiter: https://github.com/jrderuiter\n.. _Installation: https://apybiomart.readthedocs.io/en/latest/installation.html\n.. _Cookiecutter: https://github.com/audreyr/cookiecutter\n.. 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