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"author": "Andrzej Zielezinski",
"author_email": "andrzejz@amu.edu.pl",
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"License :: OSI Approved :: MIT License",
"Operating System :: MacOS",
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"Programming Language :: Python :: 2",
"Programming Language :: Python :: 2.7",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.3",
"Programming Language :: Python :: 3.4",
"Programming Language :: Python :: 3.5",
"Topic :: Scientific/Engineering",
"Topic :: Scientific/Engineering :: Bio-Informatics"
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"description": "|Travis| |PyPI| |Landscape| |Codecov|\n\nalfpy\n=====\n\nalfpy is a bionformatics Python package that provides alignment-free framework \nto compare biological sequences (DNA/RNA/protein) and infers their \nphylogenetic relationships. \n\nalfpy also contains Python scripts with user-friendly command-line interfaces \nthat let you compare unaligned FASTA sequences with more than 40 distance methods.\n\n\nLatest source code\n------------------\nThe official source code repository is at: https://github.com/aziele/alfpy\n\n\nWeb sites\n---------\nalfpy is also available as a web app: http://www.combio.pl/alfree\n\n\nRequirements\n============\n\n1. Python (https://www.python.org/) version 2.7 or >= 3.3\n2. NumPy (http://www.numpy.org/).\n\n\nInstallation\n============\n\nOption 1: Get the latest official version\n-----------------------------------------\n\nInstall the latest official version with `pip `_\n::\n\n sudo pip install alfpy\n\nIf you are not allowed to use `sudo`, install alfpy as user::\n\n sudo pip install --user alfpy\n\n\n\nOption 2: Get the latest development version\n--------------------------------------------\n\nGet it using this shell command, which requires Git::\n\n git clone https://github.com/aziele/alfpy.git\n\nIf you don't feel like using git, just download the package manually as a `gzipped tarball `_.\n\nUnpack the zip package, go to the directory and run the installation::\n\n cd alfpy\n python setup.py install\n\nor::\n\n python setup.py install --user\n\nAlfpy usage\n===========\n\nThe examples of using Alfpy are available at: http://www.combio.pl/alfree/download/.\n\n\nTesting\n=======\n\nTo run tests, go to the alfpy source code directory and type::\n\n python -m unittest discover\n\n\nIf you want to test a specific file (e.g. ``test_word_distance.py``), type::\n\n python -m unittest tests.test_word_distance\n\n\nContact\n=======\n\nDrop us any feedback at: bioinfo@amu.edu.pl or on twitter `@a_zielezinski `_.\n\nLicense\n=======\n\nalfpy is under the MIT license; see ``LICENSE.txt``. Distribution, \nmodification and redistribution, incorporation into other software,\nand pretty much everything else is allowed.\n\n\n.. |Travis| image:: https://travis-ci.org/aziele/alfpy.svg?branch=master\n :target: https://travis-ci.org/aziele/alfpy\n\n\n.. |PyPI| image:: https://img.shields.io/pypi/v/alfpy.svg?branch=master\n :target: https://pypi.python.org/pypi/alfpy\n\n.. |Landscape| image:: https://landscape.io/github/aziele/alfpy/master/landscape.svg?style=flat\n :target: https://landscape.io/github/aziele/alfpy/master\n :alt: Code Health\n\n.. |Codecov| image:: https://codecov.io/gh/aziele/alfpy/branch/master/graph/badge.svg\n :target: https://codecov.io/gh/aziele/alfpy",
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