{ "info": { "author": "Christian Panse", "author_email": "cp@fgcz.ethz.ch", "bugtrack_url": null, "classifiers": [ "Environment :: Console", "Intended Audience :: Developers", "Intended Audience :: System Administrators", "License :: OSI Approved :: GNU General Public License v3 (GPLv3)", "Operating System :: OS Independent", "Programming Language :: Python :: 3.7", "Topic :: Scientific/Engineering :: Bio-Informatics", "Topic :: Utilities" ], "description": "PyFGCZ\n======\n\n*BioBeamer* helps to collect vast amounts of instrument data (M|G|TBytes).\nAn example configuration collecting mass spectrometric measurement of more\nthen a dozen devices can be seen through\nhttp://fgcz-ms.uzh.ch/config/BioBeamer.xml.\n\n*FCC* is a minimalistic workflow engine.\nThe specification/properties of the program are as follow:\n\n- converting instrument files, e.g., RAW-files to all kinds of formats\n\n- being generic\n\n- follows FGCZ hierarch storage granularity: project, user, instrument, time range\n\n- multi-platform, host, task\n\n- configurable through XML file which means new converter by new tag in XML file NO CODE CHANGE!\n\n- stdout and errout through Syslog\n\nA current configuration can be found through http://fgcz-ms.uzh.ch/config/fcc_config.xml.\n\n\nInstall\n-------\n\n::\n pip3 install PyFGCZ\n\nUsage\n-----\n\nadapt the following scripts\n\n*Linux*\n\n::\n fcc_run_linux.py --ncpu 1 --hostname fgcz-s-021 --output __runme.bash --exec --loop\n\n\n*Windows*\n\n::\n C:\\Python37\\python.exe c:\\FGCZ\\fcc\\fcc_run_windows.py --ncpu 1 --exec --loop\n\n\nSee also\n--------\n\n- https://github.com/fgcz/BioBeamer\n\n- https://github.com/fgcz/fcc \n\n\nReferences\n----------\n\n*FCC - An automated rule-based processing tool for life science data*,\nSimon Barkow-Oesterreicher, Can T\u00fcrker and Christian Panse,\nSource Code for Biology and Medicine20138:3 `DOI: 10.1186/1751-0473-8-3`__.\n\n__ http://dx.doi.org/10.1186%2F1751-0473-8-3", "description_content_type": "", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/fgcz/PyFGCZ", "keywords": "", "license": "GPLv3", "maintainer": "", "maintainer_email": "", "name": "PyFGCZ", "package_url": "https://pypi.org/project/PyFGCZ/", "platform": "", "project_url": "https://pypi.org/project/PyFGCZ/", "project_urls": { "Homepage": "https://github.com/fgcz/PyFGCZ" }, "release_url": "https://pypi.org/project/PyFGCZ/3.0.1/", "requires_dist": null, "requires_python": ">3.5", "summary": "PyFGCZ contains BioBeamer and FCC python code.", "version": "3.0.1" }, "last_serial": 5724187, "releases": { "0.5.18": [ { "comment_text": "", "digests": { "md5": "790634800ec6464a0e1d89d9f99727fd", "sha256": "50252c2150252a16deae1f08f5b6e9043896df687acbeac9fcdcc83c0f883e4d" }, "downloads": -1, "filename": "PyFGCZ-0.5.18.tar.gz", "has_sig": false, "md5_digest": "790634800ec6464a0e1d89d9f99727fd", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 12408, "upload_time": "2017-03-08T11:40:04", "url": "https://files.pythonhosted.org/packages/9d/96/c444165e440fde40d97fae126928038ec1c74905f04420840ec9f9edfd00/PyFGCZ-0.5.18.tar.gz" } ], "0.5.19": [ { "comment_text": "", "digests": { "md5": "c5c464b2730129d2555e26b5235abe1e", "sha256": "518643e03330515bdc7a8644acfbb7f5012f1117f412d7ccf3c6059670d024c6" }, "downloads": -1, "filename": "PyFGCZ-0.5.19.tar.gz", "has_sig": false, "md5_digest": "c5c464b2730129d2555e26b5235abe1e", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 13209, "upload_time": "2018-01-25T15:46:59", "url": "https://files.pythonhosted.org/packages/6e/bb/789bd3a68b86fa89ca1b4d1a192ef8295ff113909c2e6b99ffc9db8bdc62/PyFGCZ-0.5.19.tar.gz" } ], "0.5.20": [ { "comment_text": "", "digests": { "md5": "8668524109584eb7c1e38a772ac751f6", "sha256": "aca29be9516ebf7d80cdb374c4ce430afd30443d5e65dd4549f08ebe1a0b86d5" }, "downloads": -1, "filename": "PyFGCZ-0.5.20.tar.gz", "has_sig": false, "md5_digest": "8668524109584eb7c1e38a772ac751f6", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 13208, "upload_time": "2018-01-25T16:04:56", "url": "https://files.pythonhosted.org/packages/9b/f2/1cca34891f50081c0d096d21833ccc085a2307c0d87eea42dc26454d919a/PyFGCZ-0.5.20.tar.gz" } ], "0.5.8": [ { "comment_text": "", "digests": { "md5": "d10ee6a23f9ff637d256065041b36fc4", "sha256": "57e409b1af4a874fc9a32816e4bebdeaca310f4d48c14c57e9a564f219b3aca0" }, "downloads": -1, "filename": "PyFGCZ-0.5.8.tar.gz", "has_sig": false, "md5_digest": "d10ee6a23f9ff637d256065041b36fc4", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 12131, "upload_time": "2016-09-27T07:11:27", "url": "https://files.pythonhosted.org/packages/5c/5b/3db507072f135f522ce67617eaa905887a1ca1469484b02b0e12cc82803c/PyFGCZ-0.5.8.tar.gz" } ], "3.0.1": [ { "comment_text": "", "digests": { "md5": "718669bcf5d6bd12e8d45167284e03b5", "sha256": "c82617cd19c0693c8f424bb13268efccef76369756afcf4d4ef789b1d0846eae" }, "downloads": -1, "filename": "PyFGCZ-3.0.1.tar.gz", "has_sig": false, "md5_digest": "718669bcf5d6bd12e8d45167284e03b5", "packagetype": "sdist", "python_version": "source", "requires_python": ">3.5", "size": 12737, "upload_time": "2019-08-24T10:21:02", "url": "https://files.pythonhosted.org/packages/39/9d/b76290c80a148c9d59cbce0ec2b033c955a4db281af6d5e365a30da31322/PyFGCZ-3.0.1.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "718669bcf5d6bd12e8d45167284e03b5", "sha256": "c82617cd19c0693c8f424bb13268efccef76369756afcf4d4ef789b1d0846eae" }, "downloads": -1, "filename": "PyFGCZ-3.0.1.tar.gz", "has_sig": false, "md5_digest": "718669bcf5d6bd12e8d45167284e03b5", "packagetype": "sdist", "python_version": "source", "requires_python": ">3.5", "size": 12737, "upload_time": "2019-08-24T10:21:02", "url": "https://files.pythonhosted.org/packages/39/9d/b76290c80a148c9d59cbce0ec2b033c955a4db281af6d5e365a30da31322/PyFGCZ-3.0.1.tar.gz" } ] }