{ "info": { "author": "Joe R. J. Healey", "author_email": "jrj.healey@gmail.com", "bugtrack_url": null, "classifiers": [ "Environment :: MacOS X", "Intended Audience :: Science/Research", "License :: OSI Approved :: GNU General Public License v3 (GPLv3)", "Programming Language :: Python :: 2.7", "Programming Language :: Python :: 3.7", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "# Oread\n_/\u02c8\u0254\u02d0r\u026aad/_\n\nA commandline and GUI tool for the creation of Artemis/Artemis Comparison Tool files.\n\n# Installation\nPresently, this package has a number of dependencies:\n\n - Install a `miniconda` distribution (or anything that allows access to a `pythonw` binary but `miniconda` is recommended (later this tool may be installable via `conda`)\n\n - Install `biopython` (very easy via `conda` with `$ conda install -c bioconda biopython`)\n\n - Ensure you have the BLAST+ suite installed (NOT legacy BLAST). Also very easy via `conda`: `$ conda install -c bioconda blast`\n\n - Finally, the GUI depends on the non-standard module `Gooey`. Install it via `conda` with: `$conda install -c krrishnarraj gooey` or via `pip` with `pythonw -m pip install gooey`\n\n\n# Running\nSo far this has only been tested on MacOS. For this, a \"framework\" version of python is needed.\nThis can be installed via `conda` which is strongly recommended, and then the script run with the\n`pythonw` binary:\n\n\n $ pythonw Artemisia.py\n\nThis will open the window. If you set the `Artemisia.py` script to be executable (it should already be)\nand to open with `Terminal` by default (select the file, `Command+I`, then alter the defaults), you can launch\nwith a double click.\n\nThe program can also be run from the commandline by providing the `--ignore-gooey` option to disable the GUI.\n\n $ python Oread.py --ignore-gooey <...options...>", "description_content_type": "", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/jrjhealey/Oread", "keywords": "", "license": "GNU General Public License v3.0", "maintainer": "", "maintainer_email": "", "name": "Oread", "package_url": "https://pypi.org/project/Oread/", "platform": "", "project_url": "https://pypi.org/project/Oread/", "project_urls": { "Homepage": "https://github.com/jrjhealey/Oread" }, "release_url": "https://pypi.org/project/Oread/1.3/", "requires_dist": null, "requires_python": "", "summary": "A commandline and GUI tool for the creation of Artemis/Artemis Comparison Tool files.", "version": "1.3" }, "last_serial": 5426533, "releases": { "1.1": [ { "comment_text": "", "digests": { "md5": "03bbcd622f7862e43011eb913b361a20", "sha256": "076f124becca7f435407a788f12ccb14eae28bb8eb200337c543f09cca27417b" }, "downloads": -1, "filename": "Oread-1.1-py3-none-any.whl", "has_sig": false, "md5_digest": "03bbcd622f7862e43011eb913b361a20", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 17397, "upload_time": "2019-06-20T16:04:17", "url": "https://files.pythonhosted.org/packages/ec/9c/3b4c1bcc1d3d2688d21eec5b90083d3aa0069c7bcfc89c66e0c1d95c6bf7/Oread-1.1-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "dda1fb527bfbe7d65528a2ff3dcc4424", "sha256": "fdb55ee92dc6c5ec6558b271f7d2d587a90ac5248bd99664f6f8baec8815d25e" }, "downloads": -1, "filename": "Oread-1.1.tar.gz", "has_sig": false, "md5_digest": "dda1fb527bfbe7d65528a2ff3dcc4424", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 4579, "upload_time": "2019-06-20T16:04:19", "url": "https://files.pythonhosted.org/packages/70/83/b0a255758970f65131d9e9de82740ae6a1eb1298268dcb3b55916dc481f2/Oread-1.1.tar.gz" } ], "1.2": [ { "comment_text": "", "digests": { "md5": "8e09f736697900dbc1682d6615137051", "sha256": "8521551fcd8b2fdef0bf5df56cbe1f329d9615e6a746d8d0ee979c80dc08ed01" }, "downloads": -1, "filename": "Oread-1.2.tar.gz", "has_sig": false, "md5_digest": "8e09f736697900dbc1682d6615137051", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 4566, "upload_time": "2019-06-20T16:04:21", "url": "https://files.pythonhosted.org/packages/e7/1b/d1e6ed8626716625062459609097e65052ddf2ec994748f3de2853c0852a/Oread-1.2.tar.gz" } ], "1.3": [ { "comment_text": "", "digests": { "md5": "a0f9e1456548c4e695b37a22358b7063", "sha256": "f49c64d7f0113de6fd7cf3c397188d8a7cce4022cb1f8cfccee7877aae8942f5" }, "downloads": -1, "filename": "Oread-1.3.tar.gz", "has_sig": false, "md5_digest": "a0f9e1456548c4e695b37a22358b7063", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 4564, "upload_time": "2019-06-20T16:04:22", "url": "https://files.pythonhosted.org/packages/80/d0/9a406b469c0205859c05f67b1e06a96801f91a2f21c95a940f18097f3a53/Oread-1.3.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "a0f9e1456548c4e695b37a22358b7063", "sha256": "f49c64d7f0113de6fd7cf3c397188d8a7cce4022cb1f8cfccee7877aae8942f5" }, "downloads": -1, "filename": "Oread-1.3.tar.gz", "has_sig": false, "md5_digest": "a0f9e1456548c4e695b37a22358b7063", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 4564, "upload_time": "2019-06-20T16:04:22", "url": "https://files.pythonhosted.org/packages/80/d0/9a406b469c0205859c05f67b1e06a96801f91a2f21c95a940f18097f3a53/Oread-1.3.tar.gz" } ] }