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    "info": {
        "author": "Jon Ambler",
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        "description": "# GenGraph\nA repository for the GenGraph toolkit for the creation and manipulation of graph genomes\n\nThis project aims to make genome graphs simple to create, and provide tools for their manipulation and intergration into common workflows.\n\nPlease refer to the [wiki](https://github.com/jambler24/GenGraph/wiki) for installation and usage instructions. \n\n## Quickstart \n\n    python ./gengraphTool.py make_genome_graph --seq_file <sequence_file.txt> --out_file_name <filename> --recreate_check\n\nA Docker file is also available that will contain everything you need for your first run. \n\n\n\n## Sequence file\n\nThe sequence file is a tab delimited file with 4 columns:\n\nseq_name    |\taln_name\t|   seq_path\t|   annotation_path\n------------ | ------------- | ------------- | -------------\nH37Rv |\tseq0 |\t/Users/panix/Desktop/genomes/H37Rv/sequence.fasta |\tNA\nBeijing |\tseq1 |\t/Users/panix/Desktop/genomes/Beijing-NITR203/sequence.fasta |\tNA\nH37Ra |\tseq2 |\t/Users/panix/Desktop/genomes/H37Ra/sequence.fasta |\tNA\n\n\nThe seq_name column is used as the node and edge 'ids' attribute value. It needs to be unique. \n\n\n\n",
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        "name": "GenGraph",
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