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        "author": "Colin P. Farrell",
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        "description": "# BSBolt (BiSulfite Bolt)\n## A fast and safe read alignment platform for bisulfite sequencing data\n\n[BiSuflite Bolt (BSBolt)](https://github.com/NuttyLogic/BSBolt); a fast and scalable bisulfite sequencing analysis platform. BSBolt is an integrated analysis \nplatform that offers support for bisulfite sequencing read simulation, alignment, methylation calling, data aggregation, \nand data imputation. BSBolt has been validated to work with a wide array of bisulfite sequencing data, \nincluding whole genome bisulfite sequencing (WGBS), reduced representative bisulfite sequencing data (RRBS), \nand targeted methylation sequencing data.\n \n## Documentation\n\nBSBolt documentation can be found at [bsbolt.readthedocs.io](https://bsbolt.readthedocs.io).\n\n### Installation\n\nAt installation BSBolt compiles two external dependencies \n[Bowtie2](http://bowtie-bio.sourceforge.net/bowtie2/manual.shtml)\nand [ART Read Simulation Tools](https://www.niehs.nih.gov/research/resources/software/biostatistics/art/index.cfm) \nunder the terms of the [GPLv3 License](https://www.gnu.org/licenses/gpl-3.0.html). Installation failures are generally \ndue to external C libraries not being installed or not being on path. \n\n```shell\npip3 install BSBolt -v\n```\n\n1. Python Dependencies\n    - [pysam](https://github.com/pysam-developers/pysam) >= 0.15.2\n    - [numpy](https://numpy.org/) >=1.16.3\n    - [tqdm](https://github.com/tqdm/tqdm) >= 4.31.1\n2. External C Dependencies\n    - libgsl\n    - zlib      \n    - libbz2\n    - liblzma\n    - libcurl\n    - libcrypto",
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